1.            Moein S, Nickaeen N, Roointan A, Borhani N, Heidary Z, Javanmard SH, Ghaisari J, Gheisari Y: Inefficiency of SIR models in forecasting COVID-19 epidemic: a case study of Isfahan. Scientific Reports 2021, 11:1-9.

2.            Moein S, Adibi R, Amouheidari A, Gheisari Y: Optimization of Mouse-on-Mouse Immunohistochemistry by Utilizing Fluorescent-dye Conjugated Secondary Anti-Mouse Antibody. Applied Immunohistochemistry & Molecular Morphology 2021, 29:473-477.

3.            Moein S, Adibi R, da Silva Meirelles L, Nardi NB, Gheisari Y: Cancer regeneration: Polyploid cells are the key drivers of tumor progression. Biochimica et Biophysica Acta (BBA)-Reviews on Cancer 2020:188408.

4.            Heidary Z, Ghaisari J, Moein S, Haghjooy Javanmard S: The double-edged sword role of fibroblasts in the interaction with cancer cells; an agent-based modeling approach. PloS one 2020, 15:e0232965.

5.            Nickaeen N, Ghaisari J, Heiner M, Moein S, Gheisari Y: Agent-based modeling and bifurcation analysis reveal mechanisms of macrophage polarization and phenotype pattern distribution. Scientific reports 2019, 9:1-14.

6.            Moradzadeh K, Moein S, Nickaeen N, Gheisari Y: Analysis of time-course microarray data: Comparison of common tools. Genomics 2019, 111:636-641.

7.            Rabieian R, Moein S, Khanahmad H, Mortazavi M, Gheisari Y: Transcriptional noise in intact and TGF‐beta treated human kidney cells; the importance of time‐series designs. Cell biology international 2018, 42:1265-1269.

8.            Moein S, Javanmard SH, Abedi M, Izadpanahi MH, Gheisari Y: Identification of appropriate housekeeping genes for gene expression analysis in long-term hypoxia-treated kidney cells. Advanced biomedical research 2017, 6.

9.            Heidary Z, Ghaisari J, Moein S, Naderi M, Gheisari Y: Stochastic Petri net modeling of hypoxia pathway predicts a novel incoherent feed-forward loop controlling sdf-1 expression in acute kidney injury. IEEE transactions on nanobioscience 2015, 15:19-26.